Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ddx28Q9CWT6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm13612-201ENSMUST00000119276 390 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm7287-201ENSMUST00000205267 602 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ddx28Q9CWT6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ddx28Q9CWT6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms