Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.68□□□□□ -0.06
Smc3Q9CW03 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm4271-201ENSMUST00000174444 973 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm9002-201ENSMUST00000178437 499 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm27486-201ENSMUST00000184923 80 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm24526-201ENSMUST00000082921 158 ntBASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Smc3Q9CW03 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.66□□□□□ -0.06
Smc3Q9CW03 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.66□□□□□ -0.06
Smc3Q9CW03 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm24644-201ENSMUST00000157114 139 ntBASIC14.66□□□□□ -0.06
Smc3Q9CW03 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm38092-201ENSMUST00000195600 653 ntBASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.66□□□□□ -0.06
Smc3Q9CW03 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Gm12384-201ENSMUST00000119228 919 ntBASIC14.65□□□□□ -0.06
Smc3Q9CW03 Gm15806-201ENSMUST00000120696 955 ntBASIC14.65□□□□□ -0.06
Smc3Q9CW03 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Rmrp-201ENSMUST00000157463 271 ntBASIC14.65□□□□□ -0.06
Smc3Q9CW03 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.65□□□□□ -0.06
Smc3Q9CW03 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc3Q9CW03 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc3Q9CW03 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc3Q9CW03 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc3Q9CW03 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms