Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm32025-201ENSMUST00000217960 307 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm11793-201ENSMUST00000120433 981 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm22121-201ENSMUST00000175148 54 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm3890-201ENSMUST00000182416 207 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.17□□□□□ -0.46
Msh4Q99MT2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Msh4Q99MT2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.16□□□□□ -0.46
Msh4Q99MT2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Msh4Q99MT2 Gm15198-201ENSMUST00000117283 177 ntBASIC12.16□□□□□ -0.46
Msh4Q99MT2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms