Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm12742-201ENSMUST00000117326 410 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm11637-201ENSMUST00000120601 592 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm26927-201ENSMUST00000182385 965 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm27682-201ENSMUST00000183930 110 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm10268-201ENSMUST00000085340 555 ntBASIC12.09□□□□□ -0.47
Vmp1Q99KU0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Daam2-202ENSMUST00000224595 1926 ntBASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vmp1Q99KU0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Vmp1Q99KU0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vmp1Q99KU0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm12957-201ENSMUST00000117835 377 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm16479-201ENSMUST00000121706 932 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm26185-201ENSMUST00000157692 266 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms