Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm24845-201ENSMUST00000158034 109 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm7584-201ENSMUST00000175829 940 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.05□□□□□ -0.48
Rab28Q99KL7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm11930-201ENSMUST00000117788 190 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm3096-201ENSMUST00000185770 364 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.04□□□□□ -0.48
Rab28Q99KL7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab28Q99KL7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab28Q99KL7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms