Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Gm43818-201ENSMUST00000200605 466 ntBASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Pcdhga3Q91XY5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm12390-201ENSMUST00000117897 397 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm14704-201ENSMUST00000120300 874 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm22121-201ENSMUST00000175148 54 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm29127-201ENSMUST00000188304 517 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm19163-201ENSMUST00000223313 780 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms