Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm12390-201ENSMUST00000117897 397 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm13492-201ENSMUST00000119772 665 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm27682-201ENSMUST00000183930 110 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm8602-201ENSMUST00000184045 607 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm29127-201ENSMUST00000188304 517 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm44124-201ENSMUST00000204159 472 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Gm40466-201ENSMUST00000212174 422 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.46□□□□□ -0.73
H1fooQ8VIK3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H1fooQ8VIK3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H1fooQ8VIK3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Gm15703-201ENSMUST00000120250 880 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms