Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm18935-201ENSMUST00000212692 664 ntBASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rpap2Q8VC34 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm43630-201ENSMUST00000201550 776 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm5950-201ENSMUST00000213337 772 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm7399-201ENSMUST00000032395 858 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rpap2Q8VC34 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm15370-201ENSMUST00000117158 253 ntBASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rpap2Q8VC34 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm25043-201ENSMUST00000158604 212 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms