Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm11964-201ENSMUST00000120982 444 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Snora78-201ENSMUST00000158630 128 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm6222-202ENSMUST00000182143 629 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm5370-201ENSMUST00000187187 574 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm19184-201ENSMUST00000196798 928 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm45930-201ENSMUST00000221330 292 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Trim29Q8R2Q0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Daam2-202ENSMUST00000224595 1926 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm14760-201ENSMUST00000121831 999 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm8018-201ENSMUST00000173536 789 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim29Q8R2Q0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm6007-201ENSMUST00000208170 823 ntBASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms