Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vopp1Q8R1C3 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.07□□□□□ -0.32
Vopp1Q8R1C3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vopp1Q8R1C3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm44124-201ENSMUST00000204159 472 ntBASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vopp1Q8R1C3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm15432-201ENSMUST00000121106 195 ntBASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm17391-201ENSMUST00000171036 126 ntBASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vopp1Q8R1C3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Gm22711-201ENSMUST00000116890 133 ntBASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Gm13809-201ENSMUST00000117921 597 ntBASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Gm12579-201ENSMUST00000118040 783 ntBASIC13.04□□□□□ -0.32
Vopp1Q8R1C3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms