Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Csnka2ipQ8CH19 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.83□□□□□ -0.51
Csnka2ipQ8CH19 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Csnka2ipQ8CH19 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Csnka2ipQ8CH19 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Csnka2ipQ8CH19 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm23270-201ENSMUST00000104055 131 ntBASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm13736-201ENSMUST00000119272 253 ntBASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm20482-202ENSMUST00000174729 825 ntBASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Csnka2ipQ8CH19 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm14921-201ENSMUST00000118643 908 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm11222-201ENSMUST00000119005 738 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm44405-201ENSMUST00000198952 126 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Csnka2ipQ8CH19 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Csnka2ipQ8CH19 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Csnka2ipQ8CH19 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Csnka2ipQ8CH19 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms