Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc17Q8CE13 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc17Q8CE13 Gm13611-201ENSMUST00000118269 318 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm12058-201ENSMUST00000118614 437 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm8885-201ENSMUST00000189382 598 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm45925-201ENSMUST00000218882 744 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gzmn-202ENSMUST00000225535 989 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc17Q8CE13 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Mir7032-201ENSMUST00000185154 79 ntBASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm37201-201ENSMUST00000191845 523 ntBASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm19931-201ENSMUST00000198920 368 ntBASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc17Q8CE13 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Gm45011-201ENSMUST00000207620 2297 ntBASIC13□□□□□ -0.33
Ccdc17Q8CE13 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc17Q8CE13 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms