Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Gm5370-201ENSMUST00000187187 574 ntBASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf3Q8C120 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm14127-201ENSMUST00000117906 678 ntBASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm11597-201ENSMUST00000121423 964 ntBASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf3Q8C120 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm24231-201ENSMUST00000104315 133 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm13492-201ENSMUST00000119772 665 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Snora78-201ENSMUST00000158630 128 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm37424-201ENSMUST00000191727 561 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm18062-201ENSMUST00000208020 547 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm18055-201ENSMUST00000208254 547 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm9823-201ENSMUST00000051212 327 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms