Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp47Q8BY87 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gm23200-201ENSMUST00000104379 132 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gm25732-201ENSMUST00000175168 60 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.54■□□□□ 0.4
Usp47Q8BY87 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp47Q8BY87 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm12380-201ENSMUST00000119012 544 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm12164-201ENSMUST00000121695 551 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Rprl1-201ENSMUST00000158050 327 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Mir7070-201ENSMUST00000183657 86 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm44124-201ENSMUST00000204159 472 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm7722-201ENSMUST00000120646 741 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.53■□□□□ 0.4
Usp47Q8BY87 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp47Q8BY87 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Usp47Q8BY87 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp47Q8BY87 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp47Q8BY87 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp47Q8BY87 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp47Q8BY87 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Usp47Q8BY87 Gm14277-201ENSMUST00000121195 360 ntBASIC17.52■□□□□ 0.39
Usp47Q8BY87 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp47Q8BY87 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp47Q8BY87 Gm21027-201ENSMUST00000219300 1236 ntBASIC17.52■□□□□ 0.39
Usp47Q8BY87 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp47Q8BY87 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp47Q8BY87 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms