Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm13813-201ENSMUST00000120998 787 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm14832-201ENSMUST00000121289 322 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm25732-201ENSMUST00000175168 60 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm28882-201ENSMUST00000185504 314 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm42997-202ENSMUST00000200321 985 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm45224-201ENSMUST00000208203 414 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Gm8913-201ENSMUST00000209491 641 ntBASIC11.96□□□□□ -0.49
Vrk1Q80X41 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vrk1Q80X41 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.96□□□□□ -0.5
Vrk1Q80X41 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vrk1Q80X41 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm5070-201ENSMUST00000177599 862 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm45433-201ENSMUST00000209386 247 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.95□□□□□ -0.5
Vrk1Q80X41 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Vrk1Q80X41 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.94□□□□□ -0.5
Vrk1Q80X41 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vrk1Q80X41 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms