Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm38210-201ENSMUST00000191944 809 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm28882-201ENSMUST00000185504 314 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm16296-201ENSMUST00000159905 325 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm27438-201ENSMUST00000183480 110 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm8365-201ENSMUST00000197334 648 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm43416-201ENSMUST00000201916 1015 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm45691-201ENSMUST00000206905 1120 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm6397-201ENSMUST00000161973 1069 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm9211-201ENSMUST00000182882 975 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm44545-201ENSMUST00000208262 746 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm7551-201ENSMUST00000089593 1074 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm43267-201ENSMUST00000199664 1796 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 AC159819.2-201ENSMUST00000216151 342 ntBASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Syne1Q6ZWR6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms