Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Mir7023-201ENSMUST00000185093 64 ntBASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scaf4Q6PFF0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm13612-201ENSMUST00000119276 390 ntBASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm11637-201ENSMUST00000120601 592 ntBASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Proscos-202ENSMUST00000178990 666 ntBASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scaf4Q6PFF0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms