Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm23085-201ENSMUST00000157849 293 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm3332-201ENSMUST00000189337 928 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm19287-201ENSMUST00000203190 358 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Snrnp40Q6PE01 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Mir6958-201ENSMUST00000184207 73 ntBASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm10774-201ENSMUST00000188689 204 ntBASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm9132-201ENSMUST00000210182 832 ntBASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Snrnp40Q6PE01 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Snrnp40Q6PE01 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms