Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 AC113082.1-201ENSMUST00000217324 327 ntBASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Gm18968-201ENSMUST00000221319 862 ntBASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 CT573086.4-201ENSMUST00000226729 342 ntBASIC21.33■■□□□ 1.01
Smarca2Q6DIC0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smarca2Q6DIC0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smarca2Q6DIC0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smarca2Q6DIC0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smarca2Q6DIC0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Smarca2Q6DIC0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm28937-201ENSMUST00000185413 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm29400-201ENSMUST00000187208 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm28662-201ENSMUST00000188446 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm28251-201ENSMUST00000188835 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm19587-201ENSMUST00000191395 545 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm37318-201ENSMUST00000194325 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm38017-201ENSMUST00000194768 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm37287-201ENSMUST00000195449 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm37793-201ENSMUST00000195548 695 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm3726-201ENSMUST00000203110 785 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 AC129308.3-201ENSMUST00000225652 524 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 AC165154.1-201ENSMUST00000226661 340 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm5641-201ENSMUST00000091130 1488 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC21.32■■□□□ 1
Smarca2Q6DIC0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC21.32■■□□□ 1
Smarca2Q6DIC0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarca2Q6DIC0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gm7150-201ENSMUST00000122032 981 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gm25604-201ENSMUST00000158359 133 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gm10807-201ENSMUST00000177134 795 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gm6108-201ENSMUST00000208365 367 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Lgi3-203ENSMUST00000226548 1001 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gm26134-201ENSMUST00000178484 110 ntBASIC21.31■■□□□ 1
Smarca2Q6DIC0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarca2Q6DIC0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Gm44315-201ENSMUST00000203041 219 ntBASIC21.3■■□□□ 1
Smarca2Q6DIC0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms