Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
Scube3Q66PY1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm13875-201ENSMUST00000120162 282 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm6621-201ENSMUST00000193251 772 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm38266-201ENSMUST00000194931 421 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm40332-201ENSMUST00000199847 938 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm45865-201ENSMUST00000211815 945 ntBASIC13.25□□□□□ -0.29
Scube3Q66PY1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scube3Q66PY1 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm42479-201ENSMUST00000198654 1356 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm12058-201ENSMUST00000118614 437 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm2991-201ENSMUST00000173338 480 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm2546-201ENSMUST00000182630 991 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm8581-201ENSMUST00000188636 890 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm5708-201ENSMUST00000196289 886 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm43906-201ENSMUST00000203194 906 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm44607-201ENSMUST00000205611 1090 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 AC162940.1-201ENSMUST00000224745 1167 ntBASIC13.24□□□□□ -0.29
Scube3Q66PY1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scube3Q66PY1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms