Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
AtmQ62388 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.51□□□□□ -0.57
AtmQ62388 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
AtmQ62388 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
AtmQ62388 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.51□□□□□ -0.57
AtmQ62388 Gm3551-201ENSMUST00000190750 664 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.51□□□□□ -0.57
AtmQ62388 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.51□□□□□ -0.57
AtmQ62388 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Gm12579-201ENSMUST00000118040 783 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.51□□□□□ -0.57
AtmQ62388 Gm17070-201ENSMUST00000170463 784 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Gm9022-201ENSMUST00000182482 992 ntBASIC11.51□□□□□ -0.57
AtmQ62388 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
AtmQ62388 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
AtmQ62388 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
AtmQ62388 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
AtmQ62388 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
AtmQ62388 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm12453-201ENSMUST00000121981 331 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.5□□□□□ -0.57
AtmQ62388 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.5□□□□□ -0.57
AtmQ62388 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm29763-201ENSMUST00000205306 616 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
AtmQ62388 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
AtmQ62388 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.5□□□□□ -0.57
AtmQ62388 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.5□□□□□ -0.57
AtmQ62388 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
AtmQ62388 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
AtmQ62388 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm8731-201ENSMUST00000118088 412 ntBASIC11.5□□□□□ -0.57
AtmQ62388 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
AtmQ62388 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.5□□□□□ -0.57
AtmQ62388 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.5□□□□□ -0.57
AtmQ62388 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AtmQ62388 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AtmQ62388 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
AtmQ62388 AC124392.1-201ENSMUST00000225172 5324 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.49□□□□□ -0.57
AtmQ62388 Gm25053-201ENSMUST00000103982 133 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Gm25922-201ENSMUST00000104281 130 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Gm24679-201ENSMUST00000158762 111 ntBASIC11.49□□□□□ -0.57
AtmQ62388 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.49□□□□□ -0.57
AtmQ62388 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
AtmQ62388 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.49□□□□□ -0.57
AtmQ62388 Gm42816-201ENSMUST00000198433 325 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Gm25053-202ENSMUST00000199731 132 ntBASIC11.49□□□□□ -0.57
AtmQ62388 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms