Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm8652-201ENSMUST00000181363 964 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm34701-201ENSMUST00000204213 849 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm45401-201ENSMUST00000209456 733 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 AC159886.1-201ENSMUST00000217099 1091 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm6091-201ENSMUST00000098307 165 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.46□□□□□ -0.9
Foxc1Q61572 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Foxc1Q61572 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Foxc1Q61572 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm24196-201ENSMUST00000179161 110 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm27572-201ENSMUST00000183702 255 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm29664-201ENSMUST00000191125 463 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm40466-201ENSMUST00000212174 422 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Olfr582-201ENSMUST00000098212 960 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms