Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Gm3890-201ENSMUST00000182416 207 ntBASIC12.01□□□□□ -0.49
ClpbQ60649 Gm18935-201ENSMUST00000212692 664 ntBASIC12.01□□□□□ -0.49
ClpbQ60649 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.01□□□□□ -0.49
ClpbQ60649 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClpbQ60649 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
ClpbQ60649 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.01□□□□□ -0.49
ClpbQ60649 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
ClpbQ60649 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
ClpbQ60649 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
ClpbQ60649 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClpbQ60649 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm38157-201ENSMUST00000194178 1698 ntBASIC12□□□□□ -0.49
ClpbQ60649 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm18263-201ENSMUST00000220846 1928 ntBASIC12□□□□□ -0.49
ClpbQ60649 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12□□□□□ -0.49
ClpbQ60649 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12□□□□□ -0.49
ClpbQ60649 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12□□□□□ -0.49
ClpbQ60649 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
ClpbQ60649 Gm23363-201ENSMUST00000175024 79 ntBASIC12□□□□□ -0.49
ClpbQ60649 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12□□□□□ -0.49
ClpbQ60649 Gm29396-201ENSMUST00000185659 716 ntBASIC12□□□□□ -0.49
ClpbQ60649 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm5850-201ENSMUST00000192923 1206 ntBASIC12□□□□□ -0.49
ClpbQ60649 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12□□□□□ -0.49
ClpbQ60649 AC169036.1-201ENSMUST00000227994 296 ntBASIC12□□□□□ -0.49
ClpbQ60649 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm17383-201ENSMUST00000078739 1041 ntBASIC12□□□□□ -0.49
ClpbQ60649 Mir339-201ENSMUST00000083659 96 ntBASIC12□□□□□ -0.49
ClpbQ60649 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm6203-201ENSMUST00000209575 1342 ntBASIC12□□□□□ -0.49
ClpbQ60649 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm44775-201ENSMUST00000207266 1456 ntBASIC12□□□□□ -0.49
ClpbQ60649 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
ClpbQ60649 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12□□□□□ -0.49
ClpbQ60649 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Gm43858-201ENSMUST00000199418 1778 ntBASIC12□□□□□ -0.49
ClpbQ60649 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ClpbQ60649 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ClpbQ60649 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ClpbQ60649 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.99□□□□□ -0.49
ClpbQ60649 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Gm27501-201ENSMUST00000183599 107 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
ClpbQ60649 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm3961-201ENSMUST00000204425 994 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Olfr284-202ENSMUST00000206647 966 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.99□□□□□ -0.49
ClpbQ60649 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.99□□□□□ -0.49
ClpbQ60649 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms