Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm14701-201ENSMUST00000117156 348 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm13689-201ENSMUST00000119360 685 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm27306-201ENSMUST00000183970 107 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm28693-202ENSMUST00000190758 331 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm6983-201ENSMUST00000214912 628 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms