Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm7584-201ENSMUST00000175829 940 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm37259-201ENSMUST00000193903 849 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm7783-201ENSMUST00000204795 781 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm26956-201ENSMUST00000182176 986 ntBASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Gm24136-201ENSMUST00000083374 165 ntBASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.16□□□□□ -0.3
Nlrc4Q3UP24 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm23270-201ENSMUST00000104055 131 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm13350-201ENSMUST00000120519 479 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm14726-201ENSMUST00000120623 896 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm14832-201ENSMUST00000121289 322 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm44364-201ENSMUST00000198368 141 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms