Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.68□□□□□ -0.38
Ebf1Q07802 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gm5523-201ENSMUST00000180415 997 ntBASIC12.68□□□□□ -0.38
Ebf1Q07802 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gm29787-201ENSMUST00000222129 849 ntBASIC12.68□□□□□ -0.38
Ebf1Q07802 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.68□□□□□ -0.38
Ebf1Q07802 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ebf1Q07802 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf1Q07802 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm13736-201ENSMUST00000119272 253 ntBASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm11331-201ENSMUST00000119764 288 ntBASIC12.67□□□□□ -0.38
Ebf1Q07802 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm37201-201ENSMUST00000191845 523 ntBASIC12.67□□□□□ -0.38
Ebf1Q07802 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf1Q07802 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.67□□□□□ -0.38
Ebf1Q07802 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ebf1Q07802 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms