Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Sox4Q06831 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox4Q06831 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox4Q06831 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox4Q06831 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm23270-201ENSMUST00000104055 131 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Gm24255-201ENSMUST00000104481 128 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm13570-201ENSMUST00000140763 309 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm27243-201ENSMUST00000183964 521 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm31256-201ENSMUST00000194705 506 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.29□□□□□ -0.44
Sox4Q06831 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox4Q06831 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox4Q06831 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox4Q06831 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Sox4Q06831 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Sox4Q06831 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox4Q06831 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.28□□□□□ -0.44
Sox4Q06831 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox4Q06831 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox4Q06831 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Gm14381-201ENSMUST00000122105 414 ntBASIC12.28□□□□□ -0.44
Sox4Q06831 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox4Q06831 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox4Q06831 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox4Q06831 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox4Q06831 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox4Q06831 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms