Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx3-2P97503 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx3-2P97503 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx3-2P97503 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gm30285-201ENSMUST00000214614 422 ntBASIC11.83□□□□□ -0.52
Nkx3-2P97503 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.83□□□□□ -0.52
Nkx3-2P97503 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx3-2P97503 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.83□□□□□ -0.52
Nkx3-2P97503 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx3-2P97503 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm16296-201ENSMUST00000159905 325 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm5950-201ENSMUST00000213337 772 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Mir339-201ENSMUST00000083659 96 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx3-2P97503 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.82□□□□□ -0.52
Nkx3-2P97503 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx3-2P97503 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms