Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim43bP86448 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
Trim43bP86448 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim43bP86448 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim43bP86448 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Gm43630-201ENSMUST00000201550 776 ntBASIC12.87□□□□□ -0.35
Trim43bP86448 Gm40466-201ENSMUST00000212174 422 ntBASIC12.87□□□□□ -0.35
Trim43bP86448 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim43bP86448 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43bP86448 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.87□□□□□ -0.35
Trim43bP86448 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43bP86448 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Trim43bP86448 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.86□□□□□ -0.35
Trim43bP86448 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim43bP86448 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43bP86448 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43bP86448 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Gm37424-201ENSMUST00000191727 561 ntBASIC12.86□□□□□ -0.35
Trim43bP86448 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.86□□□□□ -0.35
Trim43bP86448 Gm37497-201ENSMUST00000195830 798 ntBASIC12.86□□□□□ -0.35
Trim43bP86448 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43bP86448 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.86□□□□□ -0.35
Trim43bP86448 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim43bP86448 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43bP86448 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43bP86448 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim43bP86448 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43bP86448 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim43bP86448 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm12957-201ENSMUST00000117835 377 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Gm11618-201ENSMUST00000117946 267 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Gm16177-201ENSMUST00000120728 718 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim43bP86448 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm26035-201ENSMUST00000083065 308 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim43bP86448 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43bP86448 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms