Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SgcaP82350 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.49□□□□□ -0.73
SgcaP82350 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Gm19184-201ENSMUST00000196798 928 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.49□□□□□ -0.73
SgcaP82350 Gm6888-201ENSMUST00000221983 706 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.49□□□□□ -0.73
SgcaP82350 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.49□□□□□ -0.73
SgcaP82350 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SgcaP82350 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcaP82350 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcaP82350 Gm14701-201ENSMUST00000117156 348 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Gm4875-201ENSMUST00000118257 786 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
SgcaP82350 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcaP82350 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gm27321-201ENSMUST00000185021 205 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Gm38294-201ENSMUST00000192831 381 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Gm43575-201ENSMUST00000196420 516 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Gm42550-201ENSMUST00000201553 960 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.48□□□□□ -0.73
SgcaP82350 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
SgcaP82350 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SgcaP82350 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms