Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.18□□□□□ -0.62
SgcbP82349 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SgcbP82349 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
SgcbP82349 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcbP82349 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcbP82349 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.17□□□□□ -0.62
SgcbP82349 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm14723-201ENSMUST00000118686 215 ntBASIC11.17□□□□□ -0.62
SgcbP82349 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
SgcbP82349 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm2546-201ENSMUST00000182630 991 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.17□□□□□ -0.62
SgcbP82349 Gm37201-201ENSMUST00000191845 523 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm8227-201ENSMUST00000223306 571 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SgcbP82349 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
SgcbP82349 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SgcbP82349 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SgcbP82349 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.17□□□□□ -0.62
SgcbP82349 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcbP82349 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcbP82349 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.16□□□□□ -0.62
SgcbP82349 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.16□□□□□ -0.62
SgcbP82349 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm8018-201ENSMUST00000173536 789 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.16□□□□□ -0.62
SgcbP82349 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.16□□□□□ -0.62
SgcbP82349 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.16□□□□□ -0.62
SgcbP82349 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms