Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Gm11930-201ENSMUST00000117788 190 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Gm15808-201ENSMUST00000119046 604 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.56□□□□□ -0.08
Usp5P56399 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.56□□□□□ -0.08
Usp5P56399 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Usp5P56399 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Usp5P56399 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Usp5P56399 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Usp5P56399 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.55□□□□□ -0.08
Usp5P56399 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Gm12314-201ENSMUST00000118104 538 ntBASIC14.55□□□□□ -0.08
Usp5P56399 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.55□□□□□ -0.08
Usp5P56399 Gm27046-201ENSMUST00000182160 463 ntBASIC14.55□□□□□ -0.08
Usp5P56399 Gm3096-201ENSMUST00000185770 364 ntBASIC14.55□□□□□ -0.08
Usp5P56399 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Gm8712-201ENSMUST00000221090 701 ntBASIC14.55□□□□□ -0.08
Usp5P56399 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Usp5P56399 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.55□□□□□ -0.08
Usp5P56399 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp5P56399 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.54□□□□□ -0.08
Usp5P56399 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Usp5P56399 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.54□□□□□ -0.08
Usp5P56399 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.54□□□□□ -0.08
Usp5P56399 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.54□□□□□ -0.08
Usp5P56399 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.54□□□□□ -0.08
Usp5P56399 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.54□□□□□ -0.08
Usp5P56399 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms