Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SftpbP50405 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SftpbP50405 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SftpbP50405 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SftpbP50405 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SftpbP50405 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.77□□□□□ -0.36
SftpbP50405 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
SftpbP50405 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SftpbP50405 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
SftpbP50405 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.77□□□□□ -0.36
SftpbP50405 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SftpbP50405 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SftpbP50405 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.77□□□□□ -0.37
SftpbP50405 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SftpbP50405 Snord83b-201ENSMUST00000104546 94 ntBASIC12.77□□□□□ -0.37
SftpbP50405 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.77□□□□□ -0.37
SftpbP50405 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.77□□□□□ -0.37
SftpbP50405 Gm11637-201ENSMUST00000120601 592 ntBASIC12.77□□□□□ -0.37
SftpbP50405 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SftpbP50405 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.77□□□□□ -0.37
SftpbP50405 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.77□□□□□ -0.37
SftpbP50405 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
SftpbP50405 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SftpbP50405 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.77□□□□□ -0.37
SftpbP50405 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.77□□□□□ -0.37
SftpbP50405 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.77□□□□□ -0.37
SftpbP50405 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SftpbP50405 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.77□□□□□ -0.37
SftpbP50405 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SftpbP50405 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.76□□□□□ -0.37
SftpbP50405 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Gm14760-201ENSMUST00000121831 999 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Gm12138-201ENSMUST00000122180 951 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Gm8652-201ENSMUST00000181363 964 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.76□□□□□ -0.37
SftpbP50405 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.76□□□□□ -0.37
SftpbP50405 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.76□□□□□ -0.37
SftpbP50405 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SftpbP50405 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SftpbP50405 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.75□□□□□ -0.37
SftpbP50405 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms