Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cdx2P43241 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdx2P43241 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdx2P43241 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdx2P43241 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cdx2P43241 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Mir6546-201ENSMUST00000184460 62 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Cdx2P43241 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdx2P43241 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Cdx2P43241 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdx2P43241 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdx2P43241 Gm807-202ENSMUST00000224929 408 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Ginm1-202ENSMUST00000065124 300 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Gm26448-201ENSMUST00000082446 203 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Cdx2P43241 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdx2P43241 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.84□□□□□ -0.51
Cdx2P43241 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Cdx2P43241 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Cdx2P43241 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdx2P43241 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdx2P43241 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cdx2P43241 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Gm3332-201ENSMUST00000189337 928 ntBASIC11.83□□□□□ -0.52
Cdx2P43241 Gm45219-201ENSMUST00000205602 465 ntBASIC11.83□□□□□ -0.52
Cdx2P43241 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Cdx2P43241 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.83□□□□□ -0.52
Cdx2P43241 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.83□□□□□ -0.52
Cdx2P43241 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdx2P43241 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdx2P43241 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdx2P43241 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms