Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm15703-201ENSMUST00000120250 880 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm26361-201ENSMUST00000158868 186 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm16505-201ENSMUST00000179981 232 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Mir7070-201ENSMUST00000183657 86 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm44262-201ENSMUST00000204969 372 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nfkb1P25799 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Gm10312-201ENSMUST00000078515 489 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nfkb1P25799 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nfkb1P25799 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.86□□□□□ -0.35
Nfkb1P25799 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nfkb1P25799 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm12314-201ENSMUST00000118104 538 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Rmrp-201ENSMUST00000157463 271 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm27341-201ENSMUST00000183570 106 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm28882-201ENSMUST00000185504 314 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Rps4l-202ENSMUST00000204242 789 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm18212-201ENSMUST00000211678 889 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Gzmn-202ENSMUST00000225535 989 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Nfkb1P25799 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nfkb1P25799 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms