Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm43179-201ENSMUST00000198797 275 ntBASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Gm6007-201ENSMUST00000208170 823 ntBASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tnfrsf1bP25119 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfrsf1bP25119 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Tnfrsf1bP25119 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
Tnfrsf1bP25119 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tnfrsf1bP25119 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm24231-201ENSMUST00000104315 133 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm13342-201ENSMUST00000121055 207 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm6621-201ENSMUST00000193251 772 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tnfrsf1bP25119 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfrsf1bP25119 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms