Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TP20293 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TP20293 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
TP20293 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.79□□□□□ -0.52
TP20293 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.79□□□□□ -0.52
TP20293 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TP20293 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TP20293 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.79□□□□□ -0.52
TP20293 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TP20293 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Mir7085-201ENSMUST00000184353 66 ntBASIC11.79□□□□□ -0.52
TP20293 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.79□□□□□ -0.52
TP20293 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.79□□□□□ -0.52
TP20293 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.79□□□□□ -0.52
TP20293 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.79□□□□□ -0.52
TP20293 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
TP20293 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.79□□□□□ -0.52
TP20293 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TP20293 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.79□□□□□ -0.52
TP20293 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TP20293 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TP20293 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TP20293 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TP20293 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TP20293 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Gm16379-201ENSMUST00000161469 348 ntBASIC11.78□□□□□ -0.52
TP20293 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.78□□□□□ -0.52
TP20293 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.78□□□□□ -0.52
TP20293 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Gm8762-201ENSMUST00000193486 339 ntBASIC11.78□□□□□ -0.52
TP20293 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.78□□□□□ -0.52
TP20293 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.78□□□□□ -0.52
TP20293 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TP20293 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.77□□□□□ -0.52
TP20293 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.77□□□□□ -0.52
TP20293 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TP20293 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms