Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.65□□□□□ -0.38
VimP20152 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VimP20152 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.65□□□□□ -0.38
VimP20152 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.65□□□□□ -0.38
VimP20152 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VimP20152 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VimP20152 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
VimP20152 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
VimP20152 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VimP20152 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.64□□□□□ -0.39
VimP20152 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.64□□□□□ -0.39
VimP20152 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Gm27622-201ENSMUST00000183779 60 ntBASIC12.64□□□□□ -0.39
VimP20152 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VimP20152 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
VimP20152 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.64□□□□□ -0.39
VimP20152 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.64□□□□□ -0.39
VimP20152 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VimP20152 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VimP20152 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
VimP20152 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VimP20152 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.63□□□□□ -0.39
VimP20152 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VimP20152 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Gm6415-201ENSMUST00000118488 348 ntBASIC12.63□□□□□ -0.39
VimP20152 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VimP20152 Gm3436-201ENSMUST00000179930 840 ntBASIC12.63□□□□□ -0.39
VimP20152 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VimP20152 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
VimP20152 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VimP20152 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VimP20152 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
VimP20152 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VimP20152 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.62□□□□□ -0.39
VimP20152 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.62□□□□□ -0.39
VimP20152 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.62□□□□□ -0.39
VimP20152 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms