Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
P06344 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.15□□□□□ -0.62
P06344 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P06344 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.15□□□□□ -0.62
P06344 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
P06344 Rubie-203ENSMUST00000227803 2430 ntBASIC11.15□□□□□ -0.63
P06344 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
P06344 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
P06344 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.14□□□□□ -0.63
P06344 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P06344 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.14□□□□□ -0.63
P06344 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.14□□□□□ -0.63
P06344 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
P06344 Gm14726-201ENSMUST00000120623 896 ntBASIC11.14□□□□□ -0.63
P06344 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.14□□□□□ -0.63
P06344 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Gm26083-201ENSMUST00000157904 193 ntBASIC11.14□□□□□ -0.63
P06344 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P06344 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.14□□□□□ -0.63
P06344 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.14□□□□□ -0.63
P06344 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.14□□□□□ -0.63
P06344 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.14□□□□□ -0.63
P06344 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.14□□□□□ -0.63
P06344 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P06344 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
P06344 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.14□□□□□ -0.63
P06344 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
P06344 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P06344 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.14□□□□□ -0.63
P06344 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P06344 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.13□□□□□ -0.63
P06344 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.13□□□□□ -0.63
P06344 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.13□□□□□ -0.63
P06344 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Gm15703-201ENSMUST00000120250 880 ntBASIC11.13□□□□□ -0.63
P06344 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.13□□□□□ -0.63
P06344 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.13□□□□□ -0.63
P06344 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Gm25043-201ENSMUST00000158604 212 ntBASIC11.13□□□□□ -0.63
P06344 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms