Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vti1aO89116 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.51□□□□□ -0.25
Vti1aO89116 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.51□□□□□ -0.25
Vti1aO89116 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vti1aO89116 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Vti1aO89116 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Gm25214-201ENSMUST00000104573 129 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Gm13875-201ENSMUST00000120162 282 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Vti1aO89116 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vti1aO89116 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.5□□□□□ -0.25
Vti1aO89116 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vti1aO89116 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Vti1aO89116 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vti1aO89116 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vti1aO89116 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vti1aO89116 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vti1aO89116 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Vti1aO89116 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Gm11439-201ENSMUST00000118598 409 ntBASIC13.49□□□□□ -0.25
Vti1aO89116 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.49□□□□□ -0.25
Vti1aO89116 Gm26361-201ENSMUST00000158868 186 ntBASIC13.49□□□□□ -0.25
Vti1aO89116 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.49□□□□□ -0.25
Vti1aO89116 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.49□□□□□ -0.25
Vti1aO89116 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vti1aO89116 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms