Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.54□□□□□ -0.56
Cops4O88544 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cops4O88544 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cops4O88544 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gm13689-201ENSMUST00000119360 685 ntBASIC11.53□□□□□ -0.56
Cops4O88544 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.53□□□□□ -0.56
Cops4O88544 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Mir6977-201ENSMUST00000184960 64 ntBASIC11.53□□□□□ -0.56
Cops4O88544 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cops4O88544 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.53□□□□□ -0.56
Cops4O88544 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.53□□□□□ -0.56
Cops4O88544 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cops4O88544 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.53□□□□□ -0.56
Cops4O88544 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.52□□□□□ -0.56
Cops4O88544 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.52□□□□□ -0.56
Cops4O88544 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Cops4O88544 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cops4O88544 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.56
Cops4O88544 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cops4O88544 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Cops4O88544 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cops4O88544 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.52□□□□□ -0.57
Cops4O88544 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.52□□□□□ -0.57
Cops4O88544 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cops4O88544 Gm37917-201ENSMUST00000194711 392 ntBASIC11.52□□□□□ -0.57
Cops4O88544 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.52□□□□□ -0.57
Cops4O88544 Gm42599-201ENSMUST00000201308 469 ntBASIC11.52□□□□□ -0.57
Cops4O88544 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.52□□□□□ -0.57
Cops4O88544 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.52□□□□□ -0.57
Cops4O88544 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cops4O88544 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cops4O88544 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Cops4O88544 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cops4O88544 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms