Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm22614-201ENSMUST00000178300 165 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Gm16505-201ENSMUST00000179981 232 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Gm26956-201ENSMUST00000182176 986 ntBASIC12.69□□□□□ -0.38
Limk2O54785 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.69□□□□□ -0.38
Limk2O54785 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.69□□□□□ -0.38
Limk2O54785 Gm30285-201ENSMUST00000214614 422 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Nsd1-205ENSMUST00000224693 852 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gm22042-201ENSMUST00000082989 165 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Gm26232-201ENSMUST00000083360 166 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Gm24136-201ENSMUST00000083374 165 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Gm26110-201ENSMUST00000083971 165 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Limk2O54785 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Limk2O54785 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Limk2O54785 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.69□□□□□ -0.38
Limk2O54785 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Limk2O54785 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Limk2O54785 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.69□□□□□ -0.38
Limk2O54785 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Limk2O54785 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.68□□□□□ -0.38
Limk2O54785 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 Gm12314-201ENSMUST00000118104 538 ntBASIC12.68□□□□□ -0.38
Limk2O54785 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.68□□□□□ -0.38
Limk2O54785 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.68□□□□□ -0.38
Limk2O54785 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Limk2O54785 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.68□□□□□ -0.38
Limk2O54785 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.68□□□□□ -0.38
Limk2O54785 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.68□□□□□ -0.38
Limk2O54785 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Limk2O54785 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Limk2O54785 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Limk2O54785 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Limk2O54785 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Limk2O54785 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.68□□□□□ -0.38
Limk2O54785 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Limk2O54785 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Limk2O54785 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.67□□□□□ -0.38
Limk2O54785 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.67□□□□□ -0.38
Limk2O54785 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Limk2O54785 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.67□□□□□ -0.38
Limk2O54785 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.67□□□□□ -0.38
Limk2O54785 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.67□□□□□ -0.38
Limk2O54785 Gm14017-201ENSMUST00000121934 386 ntBASIC12.67□□□□□ -0.38
Limk2O54785 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Limk2O54785 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.67□□□□□ -0.38
Limk2O54785 Gm31256-201ENSMUST00000194705 506 ntBASIC12.67□□□□□ -0.38
Limk2O54785 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms