Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Atf6bO35451 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Atf6bO35451 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.89□□□□□ -0.67
Atf6bO35451 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.89□□□□□ -0.67
Atf6bO35451 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm43630-201ENSMUST00000201550 776 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Gm9899-201ENSMUST00000065519 555 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Atf6bO35451 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.89□□□□□ -0.67
Atf6bO35451 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.89□□□□□ -0.67
Atf6bO35451 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Atf6bO35451 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm7809-201ENSMUST00000153199 742 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm23363-201ENSMUST00000175024 79 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.88□□□□□ -0.67
Atf6bO35451 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Atf6bO35451 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Atf6bO35451 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm38002-201ENSMUST00000193255 180 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gm45880-201ENSMUST00000213041 853 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.88□□□□□ -0.67
Atf6bO35451 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Atf6bO35451 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms