Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.52□□□□□ -0.56
Gm28048F7BCN0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Gm14704-201ENSMUST00000120300 874 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Gm14719-201ENSMUST00000121891 340 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Gm6152-201ENSMUST00000151704 340 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm28048F7BCN0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm15321-201ENSMUST00000121290 288 ntBASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm23363-201ENSMUST00000175024 79 ntBASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm28048F7BCN0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms