Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc85cE9Q6B2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm14807-201ENSMUST00000116640 983 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm14942-201ENSMUST00000119642 336 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm18367-201ENSMUST00000176139 600 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm9507-202ENSMUST00000180157 654 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm9916-201ENSMUST00000192943 1228 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gm44958-201ENSMUST00000203734 736 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Olfr692-202ENSMUST00000217827 1126 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc85cE9Q6B2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm13351-201ENSMUST00000118087 414 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm11511-201ENSMUST00000118146 540 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm29499-201ENSMUST00000189151 486 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm28329-201ENSMUST00000191208 689 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm29171-201ENSMUST00000191397 486 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc85cE9Q6B2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Mir874-201ENSMUST00000104769 76 ntBASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Gm15703-201ENSMUST00000120250 880 ntBASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc85cE9Q6B2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms