Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.55□□□□□ -0.4
Gm28043E0CXC2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28043E0CXC2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.54□□□□□ -0.4
Gm28043E0CXC2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28043E0CXC2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms