Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm9063-201ENSMUST00000223299 582 ntBASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12887B1AVM1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm22175-201ENSMUST00000175007 78 ntBASIC10.08□□□□□ -0.8
Gm12887B1AVM1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm44069-201ENSMUST00000204898 506 ntBASIC10.08□□□□□ -0.8
Gm12887B1AVM1 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Chchd1-203ENSMUST00000224633 557 ntBASIC10.08□□□□□ -0.8
Gm12887B1AVM1 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.08□□□□□ -0.8
Gm12887B1AVM1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12887B1AVM1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12887B1AVM1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms