Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm14057-201ENSMUST00000120631 482 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm16479-201ENSMUST00000121706 932 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm10156-201ENSMUST00000122364 462 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Rmrp-201ENSMUST00000157463 271 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm38671-201ENSMUST00000200573 130 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Cog3-203ENSMUST00000227473 4197 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Snord83b-201ENSMUST00000104546 94 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Proscos-202ENSMUST00000178990 666 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm44882-201ENSMUST00000205702 802 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm8598-201ENSMUST00000221184 836 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm15823-201ENSMUST00000064305 670 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm24136-201ENSMUST00000083374 165 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav12d-1A0N8R0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav12d-1A0N8R0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav12d-1A0N8R0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms