Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AmfrQ9R049 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AmfrQ9R049 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AmfrQ9R049 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Gm7809-201ENSMUST00000153199 742 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.99□□□□□ -0.17
AmfrQ9R049 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Mir339-201ENSMUST00000083659 96 ntBASIC13.99□□□□□ -0.17
AmfrQ9R049 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AmfrQ9R049 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AmfrQ9R049 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Pck2-205ENSMUST00000226352 2784 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm24548-201ENSMUST00000158650 108 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm27572-201ENSMUST00000183702 255 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm38158-201ENSMUST00000194617 339 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm43133-201ENSMUST00000197472 463 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm45331-201ENSMUST00000209868 554 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm45880-201ENSMUST00000213041 853 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AmfrQ9R049 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.98□□□□□ -0.17
AmfrQ9R049 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.98□□□□□ -0.17
AmfrQ9R049 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms