Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
SrfQ9JM73 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm23251-201ENSMUST00000103773 110 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm13059-201ENSMUST00000119881 398 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm12196-201ENSMUST00000120954 262 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm25881-201ENSMUST00000157783 103 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm23085-201ENSMUST00000157849 293 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm5277-201ENSMUST00000164923 556 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.88□□□□□ -0.51
SrfQ9JM73 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm28766-201ENSMUST00000191086 234 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm37857-201ENSMUST00000191784 1199 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm43184-201ENSMUST00000197247 542 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm6905-201ENSMUST00000205729 511 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC11.88□□□□□ -0.51
SrfQ9JM73 AC139323.1-201ENSMUST00000223370 1040 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Gm1821-202ENSMUST00000227415 750 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.88□□□□□ -0.51
SrfQ9JM73 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SrfQ9JM73 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SrfQ9JM73 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm24891-201ENSMUST00000104391 136 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm12208-201ENSMUST00000122004 163 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.87□□□□□ -0.51
SrfQ9JM73 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm37684-201ENSMUST00000192779 355 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm43916-201ENSMUST00000205062 967 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm44551-201ENSMUST00000208804 171 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.87□□□□□ -0.51
SrfQ9JM73 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.87□□□□□ -0.51
SrfQ9JM73 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SrfQ9JM73 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.87□□□□□ -0.51
SrfQ9JM73 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SrfQ9JM73 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms